Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family protein | M5M_RS10005 | O86422 | Positive | 2231947 - 2233278 | 48768.8 |
| sapc family protein | M5M_RS10010 | Not Available | Negative | 2233447 - 2234184 | 27679.1 |
| hypothetical protein | M5M_RS10015 | Not Available | Negative | 2234196 - 2234738 | 19798.0 |
| dna endonuclease smra | M5M_RS10020 | Not Available | Negative | 2234794 - 2235381 | 21998.4 |
| thioesterase family protein | M5M_RS10025 | Not Available | Negative | 2235374 - 2235823 | 16669.0 |
| pep-cterm sorting domain-containing protein | M5M_RS10030 | Not Available | Negative | 2236008 - 2236601 | 21572.5 |
| acetate--coa ligase | M5M_RS10035 | Q21LV0 | Negative | 2236918 - 2238852 | 70638.9 |
| serine/threonine-protein kinase | M5M_RS19530 | P54736 | Positive | 2239191 - 2241728 | 93579.4 |
| dp-ep family protein | M5M_RS10045 | Not Available | Negative | 2241706 - 2242176 | 16532.0 |
| rna methyltransferase | M5M_RS10050 | Not Available | Negative | 2242383 - 2242898 | 18062.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
