Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | M5M_RS09955 | Q54KE6 | Positive | 2221161 - 2223164 | 72997.8 |
| hydroxymethylglutaryl-coa lyase | M5M_RS09960 | Q9I2A0 | Positive | 2223176 - 2224084 | 31645.9 |
| hypothetical protein | M5M_RS09965 | Not Available | Negative | 2224231 - 2224641 | 14801.5 |
| hypothetical protein | M5M_RS09970 | Not Available | Negative | 2224668 - 2225141 | 17307.8 |
| hypothetical protein | M5M_RS09975 | Not Available | Negative | 2225497 - 2225799 | 11396.2 |
| hypothetical protein | M5M_RS09980 | Not Available | Negative | 2225846 - 2226064 | 7799.76 |
| hypothetical protein | M5M_RS20335 | Not Available | Negative | 2226061 - 2226210 | 5481.0 |
| duf1552 domain-containing protein | M5M_RS09985 | Not Available | Negative | 2226219 - 2227547 | 47423.9 |
| duf1592 domain-containing protein | M5M_RS19525 | Not Available | Negative | 2227647 - 2231054 | 122697.0 |
| ycei family protein | M5M_RS10000 | Not Available | Negative | 2231051 - 2231737 | 24323.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
