Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6436 domain-containing protein | M5M_RS19515 | Not Available | Positive | 2210873 - 2211406 | 19405.2 |
| methyl-accepting chemotaxis protein | M5M_RS09910 | Q9I0I4 | Positive | 2211440 - 2212951 | 53982.2 |
| phosphoserine phosphatase serb | M5M_RS09915 | O28142 | Negative | 2212944 - 2214083 | 40155.5 |
| hypothetical protein | M5M_RS09920 | Not Available | Positive | 2214254 - 2215369 | 40855.1 |
| endonuclease/exonuclease/phosphatase family protein | M5M_RS09925 | Not Available | Positive | 2215342 - 2216166 | 30025.1 |
| yggn family protein | M5M_RS19520 | Not Available | Negative | 2216168 - 2216956 | 29389.7 |
| merr family dna-binding transcriptional regulator | M5M_RS09935 | Not Available | Positive | 2217137 - 2217505 | 14201.0 |
| isovaleryl-coa dehydrogenase | M5M_RS09940 | Q75IM9 | Positive | 2217531 - 2218700 | 42518.1 |
| carboxyl transferase domain-containing protein | M5M_RS09945 | Q3ULD5 | Positive | 2218759 - 2220366 | 57746.2 |
| enoyl-coa hydratase/isomerase family protein | M5M_RS09950 | V5XZU2 | Positive | 2220374 - 2221159 | 27994.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
