Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | M5M_RS09755 | P25539 | Negative | 2181236 - 2182360 | 39585.9 |
| transcriptional regulator nrdr | M5M_RS09760 | C1DLH3 | Negative | 2182357 - 2182824 | 18069.6 |
| atp-binding protein | M5M_RS19510 | Q9HUI3 | Positive | 2182960 - 2184966 | 74053.1 |
| amp-binding protein | M5M_RS09770 | Q8LKS5 | Negative | 2184963 - 2186609 | 61329.4 |
| udp-2,3-diacylglucosamine diphosphatase | M5M_RS09775 | Not Available | Positive | 2186757 - 2187530 | 29247.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | M5M_RS09780 | P72157 | Positive | 2187626 - 2188120 | 17107.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | M5M_RS09785 | P72158 | Positive | 2188120 - 2189208 | 38598.9 |
| thermonuclease family protein | M5M_RS09790 | Not Available | Positive | 2189251 - 2189691 | 16648.1 |
| eve domain-containing protein | M5M_RS09795 | Q9P016 | Positive | 2189699 - 2190148 | 16940.1 |
| hpt domain-containing protein | M5M_RS09800 | Not Available | Negative | 2190248 - 2190589 | 11776.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
