Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3313 family protein | M5M_RS09605 | Not Available | Positive | 2153300 - 2153989 | 25982.8 |
| Trna-met | Not Available | Not Available | Positive | 2154034 - 2154110 | Not Available |
| carboxylesterase | M5M_RS09615 | Not Available | Positive | 2154247 - 2155746 | 55452.0 |
| rna polymerase sigma factor rpod | M5M_RS09620 | P26480 | Negative | 2155909 - 2157774 | 70616.6 |
| dna primase | M5M_RS09625 | P0A118 | Negative | 2157898 - 2159865 | 73216.5 |
| gatb/yqey domain-containing protein | M5M_RS09630 | Not Available | Negative | 2159917 - 2160366 | 16174.8 |
| 30s ribosomal protein s21 | M5M_RS09635 | Q21MU8 | Negative | 2160488 - 2160703 | 8524.45 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | M5M_RS09640 | C5BPQ9 | Positive | 2161268 - 2162311 | 37042.7 |
| dihydroneopterin aldolase | M5M_RS09645 | P0AC17 | Positive | 2162304 - 2162657 | 13109.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | M5M_RS09650 | Not Available | Positive | 2162657 - 2163175 | 18847.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
