Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-carbamoylputrescine amidase | M5M_RS09460 | Q8VYF5 | Positive | 2117828 - 2118706 | 32843.7 |
| agmatine deiminase | M5M_RS09465 | B7V2K4 | Positive | 2118706 - 2119794 | 40080.2 |
| methyl-accepting chemotaxis protein | M5M_RS09470 | Not Available | Negative | 2119818 - 2120981 | 42327.1 |
| duf3718 domain-containing protein | M5M_RS09475 | Not Available | Negative | 2121121 - 2121489 | 13256.1 |
| voc family protein | M5M_RS09480 | Not Available | Negative | 2121859 - 2122242 | 13588.2 |
| srpbcc family protein | M5M_RS09485 | Not Available | Positive | 2122275 - 2122709 | 16362.0 |
| endothelin-converting enzyme 1 | M5M_RS20980 | Not Available | Positive | 2122772 - 2123425 | 23067.4 |
| m13 family metallopeptidase | M5M_RS20985 | P08473 | Positive | 2123332 - 2124819 | 55427.3 |
| hemolysin iii family protein | M5M_RS09495 | P67155 | Positive | 2124908 - 2125573 | 24555.8 |
| pep-cterm sorting domain-containing protein | M5M_RS20745 | Not Available | Negative | 2125651 - 2126445 | 27435.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
