Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | M5M_RS09420 | A4VPK2 | Positive | 2110244 - 2110681 | 15988.2 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | M5M_RS09425 | P0ABE0 | Positive | 2110726 - 2111187 | 15901.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | M5M_RS09430 | P37798 | Positive | 2111216 - 2112562 | 49194.4 |
| m1 family metallopeptidase | M5M_RS09435 | Q9FY49 | Positive | 2112668 - 2114524 | 69292.2 |
| acyl-coa thioesterase | M5M_RS09440 | Not Available | Positive | 2114651 - 2115049 | 14722.6 |
| cysteine-rich cwc family protein | M5M_RS19880 | Not Available | Positive | 2115046 - 2115261 | 7689.2 |
| hypothetical protein | M5M_RS09445 | Not Available | Positive | 2115481 - 2115780 | 10687.7 |
| hypothetical protein | M5M_RS09450 | Not Available | Negative | 2115989 - 2116423 | 15952.1 |
| hypothetical protein | M5M_RS20330 | Not Available | Positive | 2116506 - 2116679 | 6490.11 |
| gtp-binding protein | M5M_RS09455 | P33030 | Negative | 2116636 - 2117640 | 36493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
