Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system ybgf family protein | M5M_RS19500 | Not Available | Negative | 2095229 - 2095621 | 13992.6 |
| penicillin-binding protein 1b | M5M_RS09375 | Q9KUC0 | Negative | 2095609 - 2097906 | 84772.2 |
| adenosine kinase | M5M_RS09380 | Q55480 | Positive | 2098029 - 2099021 | 35109.5 |
| bifunctional diguanylate cyclase/phosphodiesterase | M5M_RS09385 | Q8EJM6 | Negative | 2099035 - 2101104 | 74948.9 |
| dna polymerase ii | M5M_RS09390 | P21189 | Negative | 2101244 - 2103559 | 87932.0 |
| duf2333 family protein | M5M_RS09395 | Not Available | Negative | 2103563 - 2104636 | 40130.9 |
| copper chaperone pcu(a)c | M5M_RS09400 | Q6ACU3 | Negative | 2104667 - 2105155 | 17204.8 |
| eal domain-containing protein | M5M_RS09405 | Not Available | Negative | 2105172 - 2107112 | 71585.7 |
| tetratricopeptide repeat protein | M5M_RS09410 | Not Available | Negative | 2107182 - 2107889 | 26008.5 |
| protein-disulfide reductase dsbd | M5M_RS09415 | Q9I104 | Positive | 2108115 - 2109908 | 64310.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
