Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 2074967 - 2075042 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2075297 - 2075373 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2075619 - 2077158 | Not Available |
| tyrosine--trna ligase | M5M_RS09285 | Q5E424 | Negative | 2077683 - 2078978 | 46718.7 |
| oapa family protein | M5M_RS09290 | Not Available | Positive | 2079176 - 2080546 | 50264.6 |
| anhydro-n-acetylmuramic acid kinase | M5M_RS09295 | A8H183 | Positive | 2080550 - 2081659 | 39866.3 |
| hypothetical protein | M5M_RS20325 | Not Available | Positive | 2081750 - 2082679 | 33346.6 |
| iron-sulfur cluster insertion protein erpa | M5M_RS09305 | Q21MI1 | Negative | 2082740 - 2083093 | 12504.6 |
| polymer-forming cytoskeletal protein | M5M_RS09310 | Not Available | Negative | 2083164 - 2083565 | 13899.7 |
| duf6776 family protein | M5M_RS09315 | Not Available | Negative | 2083588 - 2084328 | 27824.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
