Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna reductase | M5M_RS09220 | Q21FM2 | Positive | 2061873 - 2063141 | 45988.1 |
| peptide chain release factor 1 | M5M_RS09225 | C5BSZ6 | Positive | 2063138 - 2064226 | 40508.7 |
| peptide chain release factor n(5)-glutamine methyltransferase | M5M_RS09230 | Q8EAR4 | Positive | 2064232 - 2065071 | 30359.9 |
| molybdopterin-synthase adenylyltransferase moeb | M5M_RS09235 | P12282 | Positive | 2065068 - 2065811 | 26812.3 |
| yjgn family protein | M5M_RS09240 | Not Available | Positive | 2065870 - 2067189 | 48672.9 |
| m48 family metallopeptidase | M5M_RS09245 | Not Available | Positive | 2067186 - 2068247 | 39203.6 |
| protein-disulfide reductase dsbd | M5M_RS09250 | Q7VMZ4 | Positive | 2068313 - 2070310 | 72437.5 |
| thioredoxin family protein | M5M_RS09255 | Not Available | Positive | 2070307 - 2070909 | 21983.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2071516 - 2071631 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2071794 - 2074679 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
