Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | M5M_RS09165 | Q6ZNB7 | Positive | 2052629 - 2053849 | 47097.6 |
| duf2167 domain-containing protein | M5M_RS09170 | Not Available | Positive | 2053909 - 2054832 | 34121.3 |
| redox-regulated atpase ychf | M5M_RS09175 | Q9CP90 | Negative | 2054881 - 2055972 | 39464.1 |
| aminoacyl-trna hydrolase | M5M_RS09180 | Q21FL6 | Negative | 2055991 - 2056575 | 20979.2 |
| 50s ribosomal protein l25/general stress protein ctc | M5M_RS09185 | Q2SLA2 | Negative | 2056609 - 2057241 | 22856.5 |
| ribose-phosphate pyrophosphokinase | M5M_RS09190 | Q888C6 | Negative | 2057333 - 2058265 | 33427.6 |
| Trna-gln | Not Available | Not Available | Positive | 2058373 - 2058447 | Not Available |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | M5M_RS19495 | Q21FL9 | Negative | 2058438 - 2059304 | 31374.5 |
| lipoprotein insertase outer membrane protein lolb | M5M_RS09210 | B3PJN9 | Negative | 2059297 - 2059929 | 23149.6 |
| tetratricopeptide repeat protein | M5M_RS09215 | P42810 | Negative | 2059941 - 2061674 | 63967.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
