Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cox15/ctaa family protein | M5M_RS09115 | Q2Y9R4 | Negative | 2040652 - 2041713 | 39506.1 |
| hypothetical protein | M5M_RS19490 | Not Available | Positive | 2041821 - 2042303 | 17567.1 |
| abc transporter permease | M5M_RS09125 | Q9ZE51 | Positive | 2042358 - 2043470 | 39773.1 |
| abc transporter atp-binding protein | M5M_RS09130 | P63358 | Positive | 2043467 - 2044222 | 27355.8 |
| mlad family protein | M5M_RS09135 | Not Available | Positive | 2044219 - 2045190 | 35495.2 |
| membrane integrity-associated transporter subunit pqic | M5M_RS09140 | Not Available | Positive | 2045190 - 2045777 | 21480.8 |
| chase domain-containing protein | M5M_RS09145 | P0AEC7 | Positive | 2045907 - 2048627 | 98599.4 |
| Trna-met | Not Available | Not Available | Positive | 2048687 - 2048763 | Not Available |
| dmt family transporter | M5M_RS09155 | Not Available | Negative | 2048848 - 2049777 | 33793.6 |
| tonb-dependent receptor | M5M_RS09160 | Q01674 | Positive | 2050037 - 2052505 | 89258.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
