Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | M5M_RS09070 | A1TYJ5 | Negative | 2035071 - 2036264 | 43317.0 |
| Trna-thr | Not Available | Not Available | Positive | 2036348 - 2036423 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2036459 - 2036532 | Not Available |
| hypothetical protein | M5M_RS19875 | Not Available | Negative | 2036523 - 2036762 | 8164.77 |
| Trna-tyr | Not Available | Not Available | Positive | 2036777 - 2036860 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2036953 - 2037028 | Not Available |
| spor domain-containing protein | M5M_RS09095 | Not Available | Negative | 2037085 - 2037783 | 25326.5 |
| type iii pantothenate kinase | M5M_RS19485 | A4XZA6 | Negative | 2037825 - 2038544 | 24521.9 |
| bifunctional biotin--[acetyl-coa-carboxylase] ligase/biotin operon repressor bira | M5M_RS09105 | P37416 | Negative | 2038534 - 2039511 | 34229.2 |
| alanine racemase | M5M_RS09110 | Q2RXD1 | Negative | 2039511 - 2040617 | 39689.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
