Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 | M5M_RS09020 | Q21M91 | Negative | 2022353 - 2022724 | 13818.0 |
| dna-directed rna polymerase subunit beta' | M5M_RS09025 | B3PK31 | Negative | 2022924 - 2027144 | 155372.0 |
| dna-directed rna polymerase subunit beta | M5M_RS09030 | B3PK30 | Negative | 2027227 - 2031312 | 151285.0 |
| 50s ribosomal protein l7/l12 | M5M_RS09035 | Q2S904 | Negative | 2031538 - 2031909 | 12527.0 |
| 50s ribosomal protein l10 | M5M_RS09040 | Q6LLW0 | Negative | 2031976 - 2032470 | 17327.9 |
| 50s ribosomal protein l1 | M5M_RS09045 | B3PK27 | Negative | 2032687 - 2033382 | 24080.3 |
| 50s ribosomal protein l11 | M5M_RS09050 | Q0VSM6 | Negative | 2033385 - 2033816 | 15015.3 |
| transcription termination/antitermination protein nusg | M5M_RS09055 | Q9HWC4 | Negative | 2033976 - 2034509 | 20181.3 |
| preprotein translocase subunit sece | M5M_RS09060 | Q9HWC3 | Negative | 2034526 - 2034894 | 13340.9 |
| Trna-trp | Not Available | Not Available | Positive | 2034927 - 2035002 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
