Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit alpha | M5M_RS08875 | Q21M33 | Negative | 2004693 - 2005688 | 36417.7 |
| 30s ribosomal protein s4 | M5M_RS08880 | C5BQ85 | Negative | 2005711 - 2006331 | 23293.2 |
| 30s ribosomal protein s11 | M5M_RS08885 | C5BQ84 | Negative | 2006344 - 2006736 | 13880.6 |
| 30s ribosomal protein s13 | M5M_RS08890 | B3PK59 | Negative | 2006776 - 2007132 | 13256.3 |
| 50s ribosomal protein l36 | M5M_RS19870 | B3PK58 | Negative | 2007341 - 2007457 | 4423.7 |
| preprotein translocase subunit secy | M5M_RS08895 | Q9HWF5 | Negative | 2007487 - 2008803 | 47810.4 |
| 50s ribosomal protein l15 | M5M_RS08900 | C5BQ80 | Negative | 2008817 - 2009251 | 15131.7 |
| 50s ribosomal protein l30 | M5M_RS08905 | Q21M40 | Negative | 2009255 - 2009440 | 6723.35 |
| 30s ribosomal protein s5 | M5M_RS08910 | Q0VSI6 | Negative | 2009472 - 2009990 | 18042.8 |
| 50s ribosomal protein l18 | M5M_RS08915 | B3PK53 | Negative | 2010001 - 2010351 | 12539.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
