Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr c-terminal-related transcriptional regulator | M5M_RS08825 | P52106 | Positive | 1992522 - 1993166 | 24301.5 |
| curli production assembly/transport protein csge | M5M_RS08830 | P0A201 | Positive | 1993168 - 1993584 | 15763.7 |
| curli assembly protein csgf | M5M_RS08835 | Not Available | Positive | 1993594 - 1993992 | 13777.0 |
| csgg/hfab family protein | M5M_RS08840 | P0A205 | Positive | 1994009 - 1994878 | 31255.6 |
| ppe repeat-containing protein | M5M_RS08845 | Not Available | Positive | 1995060 - 1995614 | 19475.5 |
| curlin-associated protein | M5M_RS08850 | Not Available | Positive | 1995637 - 1996755 | 38929.9 |
| excinuclease abc subunit uvra | M5M_RS08855 | Q9HWG0 | Positive | 1996866 - 1999721 | 105340.0 |
| sulfotransferase | M5M_RS08860 | Not Available | Negative | 1999852 - 2001423 | 57517.4 |
| tonb-dependent receptor | M5M_RS08865 | Not Available | Negative | 2001752 - 2003992 | 83030.5 |
| 50s ribosomal protein l17 | M5M_RS08870 | Q21M32 | Negative | 2004230 - 2004613 | 14310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
