Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | M5M_RS08725 | Not Available | Positive | 1966978 - 1968261 | 47620.7 |
| gnat family n-acetyltransferase | M5M_RS08730 | Not Available | Negative | 1968242 - 1969291 | 39759.6 |
| tetratricopeptide repeat protein | M5M_RS08735 | Not Available | Negative | 1969288 - 1971927 | 97728.3 |
| hypothetical protein | M5M_RS08740 | Not Available | Negative | 1971949 - 1973238 | 48520.7 |
| cpsd/capb family tyrosine-protein kinase | M5M_RS20145 | Not Available | Negative | 1973259 - 1974461 | 44223.0 |
| xrta system polysaccharide chain length determinant | M5M_RS08750 | Not Available | Negative | 1974480 - 1975988 | 57375.1 |
| xrta/pep-cterm system exopolysaccharide export protein | M5M_RS08755 | Not Available | Negative | 1976017 - 1976628 | 21907.4 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | M5M_RS08760 | B3FN88 | Negative | 1976659 - 1978125 | 54698.2 |
| vi polysaccharide biosynthesis udp-n-acetylglucosamine c-6 dehydrogenase tvib | M5M_RS08765 | Q04972 | Positive | 1978371 - 1979645 | 46902.4 |
| nad-dependent epimerase | M5M_RS08770 | P39858 | Positive | 1979671 - 1980678 | 37437.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
