Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | M5M_RS08675 | Not Available | Negative | 1955835 - 1957085 | 46783.0 |
| lipopolysaccharide biosynthesis protein | M5M_RS08680 | Not Available | Negative | 1957082 - 1958524 | 52866.9 |
| acyltransferase | M5M_RS08685 | P23364 | Positive | 1958700 - 1959323 | 21651.8 |
| gdsl-type esterase/lipase family protein | M5M_RS08690 | Not Available | Negative | 1959309 - 1960001 | 24852.8 |
| polysaccharide deacetylase family protein | M5M_RS08695 | Not Available | Positive | 1960025 - 1961029 | 37906.6 |
| polysaccharide deacetylase family protein | M5M_RS08700 | Not Available | Negative | 1961007 - 1962044 | 38912.7 |
| exosortase/archaeosortase family protein | M5M_RS08705 | Not Available | Negative | 1962044 - 1963537 | 54912.4 |
| glycosyltransferase | M5M_RS08710 | Not Available | Negative | 1963528 - 1964628 | 40485.3 |
| glycosyltransferase family 2 protein | M5M_RS08715 | Not Available | Positive | 1964704 - 1965852 | 42607.9 |
| degt/dnrj/eryc1/strs family aminotransferase | M5M_RS08720 | Not Available | Positive | 1965852 - 1966985 | 41408.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
