Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS08420 | Not Available | Negative | 1901689 - 1902432 | 26066.4 |
| 2-isopropylmalate synthase | M5M_RS08425 | Q605K7 | Negative | 1902472 - 1904019 | 55739.2 |
| marr family winged helix-turn-helix transcriptional regulator | M5M_RS08430 | O34777 | Negative | 1904287 - 1904736 | 16695.5 |
| glutathione peroxidase | M5M_RS08435 | O32770 | Negative | 1904749 - 1905231 | 17796.2 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1906032 - 1906147 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1906310 - 1909196 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1909484 - 1909559 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1909789 - 1909865 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1909985 - 1911523 | Not Available |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | M5M_RS08465 | Q9ZM68 | Negative | 1912135 - 1912983 | 30421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
