Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2007 domain-containing protein | M5M_RS08130 | Not Available | Positive | 1844079 - 1844459 | 13856.2 |
| duf5329 domain-containing protein | M5M_RS08135 | Q47702 | Negative | 1844432 - 1844833 | 14649.5 |
| tigr01777 family oxidoreductase | M5M_RS08140 | P77775 | Positive | 1844944 - 1845837 | 32110.0 |
| methyltransferase | M5M_RS08145 | Not Available | Positive | 1845868 - 1846482 | 22978.4 |
| biopolymer transporter exbd | M5M_RS08150 | Not Available | Negative | 1846539 - 1846961 | 15927.1 |
| hopj type iii effector protein | M5M_RS08155 | Not Available | Positive | 1847475 - 1847837 | 13570.0 |
| hypothetical protein | M5M_RS08160 | Not Available | Negative | 1847876 - 1848679 | 29254.4 |
| dna polymerase iv | M5M_RS08165 | Q87Y22 | Negative | 1848905 - 1849975 | 38494.9 |
| hypothetical protein | M5M_RS20140 | Not Available | Positive | 1850367 - 1850981 | 20578.3 |
| lysr family transcriptional regulator | M5M_RS08175 | P37499 | Negative | 1851236 - 1852114 | 31915.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
