Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS08080 | Not Available | Positive | 1830162 - 1830476 | 11740.3 |
| tonb-dependent receptor | M5M_RS08085 | Not Available | Positive | 1830625 - 1832937 | 84872.5 |
| arac family transcriptional regulator | M5M_RS08090 | P72171 | Positive | 1833161 - 1834147 | 36637.5 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS08095 | Not Available | Positive | 1834203 - 1835252 | 37862.1 |
| efflux rnd transporter permease subunit | M5M_RS08100 | P25197 | Positive | 1835252 - 1838386 | 114843.0 |
| m48 family metallopeptidase | M5M_RS08105 | Not Available | Negative | 1838430 - 1839242 | 29031.5 |
| rdd family protein | M5M_RS08110 | Not Available | Negative | 1839286 - 1839813 | 20101.0 |
| uracil-dna glycosylase family protein | M5M_RS08115 | O86222 | Negative | 1839810 - 1840418 | 22853.6 |
| atp-binding protein | M5M_RS08120 | Q54YZ9 | Positive | 1840444 - 1842600 | 80251.5 |
| mipa/ompv family protein | M5M_RS08125 | Not Available | Positive | 1842663 - 1844042 | 51436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
