Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | M5M_RS07975 | Not Available | Positive | 1807081 - 1808379 | 44643.2 |
| carbonate dehydratase | M5M_RS07980 | Not Available | Positive | 1808700 - 1809347 | 24437.3 |
| cupin domain-containing protein | M5M_RS07985 | Not Available | Negative | 1809351 - 1809740 | 14277.1 |
| glycerophosphodiester phosphodiesterase family protein | M5M_RS07990 | D4AIS9 | Positive | 1809847 - 1811124 | 47084.6 |
| hypothetical protein | M5M_RS07995 | Not Available | Negative | 1811125 - 1811454 | 12097.4 |
| metal-dependent hydrolase | M5M_RS08000 | P45570 | Negative | 1811441 - 1811989 | 20036.9 |
| dead/deah box helicase family protein | M5M_RS08005 | Not Available | Negative | 1812001 - 1814703 | 100844.0 |
| yebc/pmpr family dna-binding transcriptional regulator | M5M_RS08010 | Q88JU7 | Negative | 1814728 - 1815429 | 25176.8 |
| fumarate hydratase | M5M_RS08015 | Q58690 | Negative | 1815670 - 1817187 | 54354.8 |
| hypothetical protein | M5M_RS20135 | Not Available | Positive | 1817501 - 1817704 | 7254.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
