Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4861 domain-containing protein | M5M_RS07920 | Not Available | Positive | 1794773 - 1795990 | 43561.0 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | M5M_RS07925 | Q5WJC2 | Positive | 1796005 - 1796835 | 30747.4 |
| hypothetical protein | M5M_RS07935 | Not Available | Negative | 1797314 - 1799323 | 71989.5 |
| mannonate dehydratase | M5M_RS07940 | Q21L94 | Positive | 1799660 - 1800844 | 43639.9 |
| glucuronate isomerase | M5M_RS07945 | Q8PET9 | Positive | 1800861 - 1802249 | 52377.8 |
| mannitol dehydrogenase family protein | M5M_RS07950 | P39160 | Positive | 1802246 - 1803733 | 54729.7 |
| fadr/gntr family transcriptional regulator | M5M_RS07955 | P44487 | Negative | 1803789 - 1804496 | 26107.2 |
| sugar kinase | M5M_RS07960 | P37647 | Positive | 1804715 - 1805632 | 33726.2 |
| trap transporter substrate-binding protein | M5M_RS07965 | Not Available | Positive | 1805625 - 1806602 | 36148.1 |
| trap transporter small permease | M5M_RS07970 | P44994 | Positive | 1806599 - 1807081 | 17803.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
