Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease t | M5M_RS07870 | A1U3L2 | Positive | 1780639 - 1781292 | 23804.0 |
| ef-hand domain-containing protein | M5M_RS07875 | Not Available | Negative | 1781383 - 1781829 | 16547.3 |
| aspartate carbamoyltransferase | M5M_RS07880 | B3PKF2 | Negative | 1782009 - 1783016 | 37428.6 |
| duf2971 domain-containing protein | M5M_RS07885 | Not Available | Positive | 1783126 - 1784031 | 34544.9 |
| exodeoxyribonuclease i | M5M_RS07890 | P04995 | Negative | 1784050 - 1785474 | 53236.1 |
| tonb-dependent receptor | M5M_RS07895 | Not Available | Negative | 1785656 - 1788619 | 107086.0 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | M5M_RS07900 | T2KPJ7 | Negative | 1788928 - 1791312 | 88540.5 |
| alginate lyase family protein | M5M_RS19455 | Not Available | Negative | 1791332 - 1792570 | 45616.0 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | M5M_RS07910 | Not Available | Negative | 1792570 - 1793343 | 26611.7 |
| glycoside hydrolase family 105 protein | M5M_RS07915 | P9WF04 | Negative | 1793336 - 1794643 | 47478.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
