Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit beta | M5M_RS07715 | Q9PL92 | Positive | 1752116 - 1753357 | 46648.4 |
| hypothetical protein | M5M_RS07720 | Not Available | Positive | 1753431 - 1753637 | 7654.94 |
| diguanylate cyclase | M5M_RS07725 | Q8X8Q3 | Positive | 1753701 - 1754606 | 33018.5 |
| hypothetical protein | M5M_RS07730 | Not Available | Negative | 1755715 - 1756023 | 11536.5 |
| lysoplasmalogenase | M5M_RS07735 | P64838 | Positive | 1756144 - 1756797 | 23532.7 |
| duf3833 domain-containing protein | M5M_RS07740 | Not Available | Negative | 1756773 - 1757324 | 21373.9 |
| chalcone isomerase family protein | M5M_RS07745 | Not Available | Negative | 1757321 - 1757830 | 18626.4 |
| mate family efflux transporter | M5M_RS07750 | O07940 | Positive | 1757952 - 1759334 | 49485.8 |
| hypothetical protein | M5M_RS20130 | Not Available | Negative | 1759323 - 1760297 | 37664.3 |
| cyclopropane-fatty-acyl-phospholipid synthase family protein | M5M_RS07765 | O53732 | Negative | 1760861 - 1762132 | 47873.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
