Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxd | M5M_RS07410 | B3PB33 | Positive | 1671980 - 1673041 | 37998.9 |
| electron transport complex subunit rsxg | M5M_RS07415 | A1S6N3 | Positive | 1673038 - 1673673 | 22726.2 |
| electron transport complex subunit e | M5M_RS07420 | B3PB31 | Positive | 1673615 - 1674424 | 28858.4 |
| tetr/acrr family transcriptional regulator | M5M_RS07425 | Not Available | Positive | 1674588 - 1675283 | 25896.4 |
| tonb-dependent receptor | M5M_RS19435 | Not Available | Positive | 1675561 - 1678164 | 93055.9 |
| abc transporter substrate-binding protein | M5M_RS07435 | Not Available | Negative | 1678374 - 1679168 | 28875.9 |
| c-type cytochrome | M5M_RS07440 | Not Available | Positive | 1679494 - 1680096 | 21207.3 |
| cytochrome-c peroxidase | M5M_RS07445 | Q50426 | Positive | 1680102 - 1681316 | 44680.6 |
| parallel beta-helix domain-containing protein | M5M_RS07450 | Not Available | Positive | 1681309 - 1682853 | 55365.6 |
| murr/rpir family transcriptional regulator | M5M_RS07455 | P37767 | Negative | 1682990 - 1683838 | 30487.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
