Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | M5M_RS07315 | P63344 | Negative | 1653993 - 1655921 | 70948.1 |
| ribosome assembly rna-binding protein yhby | M5M_RS07320 | P95453 | Positive | 1656208 - 1656516 | 11427.1 |
| aminoacyl-trna deacylase | M5M_RS07325 | Not Available | Positive | 1656772 - 1657332 | 21248.1 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | M5M_RS07330 | P45388 | Negative | 1657329 - 1657739 | 15283.7 |
| dctp deaminase | M5M_RS07335 | B3PEB5 | Negative | 1657785 - 1658354 | 21381.3 |
| vit family protein | M5M_RS07340 | Q9P6J2 | Positive | 1658495 - 1659190 | 23769.2 |
| phospholipase d-like domain-containing protein | M5M_RS07345 | Not Available | Positive | 1659209 - 1660648 | 53538.7 |
| phospholipase d-like domain-containing protein | M5M_RS07350 | Not Available | Positive | 1660570 - 1661055 | 18584.3 |
| hypothetical protein | M5M_RS07355 | Not Available | Negative | 1661138 - 1661521 | 13558.3 |
| lipocalin family protein | M5M_RS07360 | Q08790 | Negative | 1661549 - 1662082 | 20266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
