Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna-(ms[2]io[6]a)-hydroxylase | M5M_RS00460 | Q88KV1 | + | 100837 - 101484 | 24302.3 |
| response regulator | M5M_RS00465 | Q93P00 | - | 101497 - 101922 | 15697.2 |
| udp-2,3-diacylglucosamine diphosphatase | M5M_RS00470 | B3PHJ5 | - | 102014 - 102736 | 26663.7 |
| peptidylprolyl isomerase | M5M_RS00475 | P83221 | - | 102742 - 103233 | 17893.1 |
| glutamine--trna ligase/yqey domain fusion protein | M5M_RS00480 | C1DHE5 | + | 103356 - 105035 | 63733.4 |
| cysteine--trna ligase | M5M_RS00485 | C5BI15 | + | 105054 - 106427 | 51343.9 |
| oprd family outer membrane porin | M5M_RS00490 | Not Available | - | 106465 - 107844 | 51454.2 |
| porphobilinogen synthase | M5M_RS00495 | P0ACB2 | + | 108018 - 108992 | 35326.6 |
| duf3012 domain-containing protein | M5M_RS00500 | Not Available | + | 109010 - 109177 | 6043.47 |
| wadjet anti-phage system protein jeta family protein | M5M_RS00505 | Not Available | + | 109206 - 110702 | 57232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.