Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | DSM 6842 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas rubra strain DSM 6842 chromosome II contig044,
Gene Summary
Adenine Count
1597026 bp
Thymine Count
1609523 bp
Guanine Count
1496789 bp
Cytosine Count
1440417 bp
Genome Length
6143755 bp
Protein-coding Genes
5310 genes
Non-Coding Genes
311 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0042 nucleotide-binding protein | PRUB_a1578 | Not Available | Negative | 92821 - 93666 | 32317.8 |
| pts system, nitrogen regulatory iia component | PRUB_a1579 | Not Available | Negative | 93679 - 94134 | 16680.2 |
| putative sigma-54 modulation protein | PRUB_a1580 | Not Available | Negative | 94137 - 94424 | 11054.3 |
| rna polymerase sigma-54 factor | PRUB_a1581 | Not Available | Negative | 94450 - 95958 | 56424.6 |
| lipopolysaccharide export system atp-binding protein | PRUB_a1582 | Not Available | Negative | 96003 - 96728 | 26709.5 |
| lipopolysaccharide export system protein lpta | PRUB_a1583 | Not Available | Negative | 96725 - 97264 | 19869.8 |
| lipopolysaccharide export system protein lptc | PRUB_a1584 | Not Available | Negative | 97254 - 97808 | 20962.0 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | PRUB_a1585 | Not Available | Negative | 97805 - 98356 | 19933.1 |
| arabinose-5-phosphate isomerase | PRUB_a1586 | Not Available | Negative | 98357 - 99328 | 34202.9 |
| cation:h+ antiporter | PRUB_a1587 | Not Available | Negative | 99338 - 100297 | 33508.0 |
Pathways
1 pathway
Health Effects
No health effects information available for this bacterium.
