Pseudomonas ogarae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas ogarae is a bacterial species characterized by having two replicons. This trait is significant as it suggests a complex genomic structure that may play a role in its adaptability and survival in various environments. The genome of Pseudomonas ogarae is represented by two accession numbers: MWTP00000000.1 and NC_016830.1. The existence of multiple replicons can confer certain advantages, such as the ability to harbor diverse genetic elements, which may enhance metabolic capabilities or facilitate the uptake of plasmids containing antibiotic resistance genes. This adaptability is particularly important for bacteria like Pseudomonas ogarae, which are often found in diverse ecological niches, including soil and water environments. From an ecological perspective, Pseudomonas species are known for their role in biogeochemical cycles, including nitrogen and carbon cycling. The presence of Pseudomonas ogarae in various ecosystems indicates its potential contribution to these processes, although specific ecological roles of this particular species would require further investigation. Its dual-replicon structure may enable it to thrive in fluctuating environmental conditions, thereby influencing microbial community dynamics and ecosystem health. This adaptability underscores the importance of studying Pseudomonas ogarae and similar organisms in understanding microbial ecology and their potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas ogarae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas ogarae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas ogarae, complete sequence.

Gene Summary

Adenine Count

1334506 bp

Thymine Count

1350156 bp

Guanine Count

2099584 bp

Cytosine Count

2061586 bp

Genome Length

6845832 bp

Protein-coding Genes

6007 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isochorismate lyasePSF113_RS46455Not AvailableNegative3739072 - 373938311696.0
isochorismatase family proteinPSF113_RS46460Not AvailableNegative3739444 - 373996218501.4
hypothetical proteinPSF113_RS46465Not AvailableNegative3740386 - 374066710156.1
lysr substrate-binding domain-containing proteinPSF113_RS46470Not AvailableNegative3741215 - 374214133839.6
lyse family translocatorPSF113_RS46475Not AvailablePositive3742248 - 374285621523.8
sugar abc transporter permeasePSF113_RS46480Not AvailableNegative3742867 - 374400339916.2
d-xylose abc transporter atp-binding proteinPSF113_RS46485Not AvailableNegative3744004 - 374556056208.5
d-xylose abc transporter substrate-binding proteinPSF113_RS46490Not AvailableNegative3745743 - 374674435927.2
xylose isomerasePSF113_RS46495Not AvailableNegative3746891 - 374820749228.9
xylr family transcriptional regulatorPSF113_RS46500Not AvailablePositive3748362 - 374954643309.1

Displaying genes 3361 – 3370 of 13072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.