Pseudomonas ogarae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas ogarae is a bacterial species characterized by having two replicons. This trait is significant as it suggests a complex genomic structure that may play a role in its adaptability and survival in various environments. The genome of Pseudomonas ogarae is represented by two accession numbers: MWTP00000000.1 and NC_016830.1. The existence of multiple replicons can confer certain advantages, such as the ability to harbor diverse genetic elements, which may enhance metabolic capabilities or facilitate the uptake of plasmids containing antibiotic resistance genes. This adaptability is particularly important for bacteria like Pseudomonas ogarae, which are often found in diverse ecological niches, including soil and water environments. From an ecological perspective, Pseudomonas species are known for their role in biogeochemical cycles, including nitrogen and carbon cycling. The presence of Pseudomonas ogarae in various ecosystems indicates its potential contribution to these processes, although specific ecological roles of this particular species would require further investigation. Its dual-replicon structure may enable it to thrive in fluctuating environmental conditions, thereby influencing microbial community dynamics and ecosystem health. This adaptability underscores the importance of studying Pseudomonas ogarae and similar organisms in understanding microbial ecology and their potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas ogarae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas ogarae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas ogarae, complete sequence.

Gene Summary

Adenine Count

1334506 bp

Thymine Count

1350156 bp

Guanine Count

2099584 bp

Cytosine Count

2061586 bp

Genome Length

6845832 bp

Protein-coding Genes

6007 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l20PSF113_RS40585Not AvailablePositive2363365 - 236372113314.6
phenylalanine--trna ligase subunit alphaPSF113_RS40590Not AvailablePositive2363831 - 236484738054.7
phenylalanine--trna ligase subunit betaPSF113_RS40595Not AvailablePositive2364884 - 236726286687.1
integration host factor subunit alphaPSF113_RS40600Not AvailablePositive2367266 - 236756811476.8
merr family transcriptional regulatorPSF113_RS40605Not AvailablePositive2367549 - 236790513921.0
Trna-proNot AvailableNot AvailablePositive2367996 - 2368072Not Available
sugar abc transporter substrate-binding proteinPSF113_RS40615Not AvailableNegative2368301 - 236922433350.3
phytanoyl-coa dioxygenase family proteinPSF113_RS40620Not AvailableNegative2369273 - 237042742925.8
sdr family oxidoreductasePSF113_RS40625Not AvailableNegative2370424 - 237127230176.1
laci family dna-binding transcriptional regulatorPSF113_RS40630Not AvailablePositive2371397 - 237242237976.7

Displaying genes 2161 – 2170 of 13072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.