Pseudomonas ogarae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas ogarae is a bacterial species characterized by having two replicons. This trait is significant as it suggests a complex genomic structure that may play a role in its adaptability and survival in various environments. The genome of Pseudomonas ogarae is represented by two accession numbers: MWTP00000000.1 and NC_016830.1. The existence of multiple replicons can confer certain advantages, such as the ability to harbor diverse genetic elements, which may enhance metabolic capabilities or facilitate the uptake of plasmids containing antibiotic resistance genes. This adaptability is particularly important for bacteria like Pseudomonas ogarae, which are often found in diverse ecological niches, including soil and water environments. From an ecological perspective, Pseudomonas species are known for their role in biogeochemical cycles, including nitrogen and carbon cycling. The presence of Pseudomonas ogarae in various ecosystems indicates its potential contribution to these processes, although specific ecological roles of this particular species would require further investigation. Its dual-replicon structure may enable it to thrive in fluctuating environmental conditions, thereby influencing microbial community dynamics and ecosystem health. This adaptability underscores the importance of studying Pseudomonas ogarae and similar organisms in understanding microbial ecology and their potential applications in biotechnology or bioremediation efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas ogarae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas ogarae
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas ogarae, complete sequence.

Gene Summary

Adenine Count

1334506 bp

Thymine Count

1350156 bp

Guanine Count

2099584 bp

Cytosine Count

2061586 bp

Genome Length

6845832 bp

Protein-coding Genes

6007 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gluconokinasePSF113_RS36965Not AvailablePositive1534619 - 153515219005.7
gntp family permeasePSF113_RS36970Not AvailablePositive1535245 - 153659747281.0
alanine transaminasePSF113_RS36975Not AvailableNegative1536718 - 153793545027.5
lyse family translocatorPSF113_RS36980Not AvailablePositive1538144 - 153880623238.7
gyri-like domain-containing proteinPSF113_RS36985Not AvailablePositive1538887 - 153937518815.1
pyridoxamine 5'-phosphate oxidase family proteinPSF113_RS36990Not AvailableNegative1539387 - 153999222105.4
gnat family n-acetyltransferasePSF113_RS36995Not AvailableNegative1540028 - 154051317523.3
yybh family proteinPSF113_RS37000Not AvailablePositive1540656 - 154109016448.6
ycii family proteinPSF113_RS37005Not AvailablePositive1541158 - 154150212342.7
type vi secretion system-associated fha domain protein taghPSF113_RS37010Not AvailablePositive1541530 - 15416584770.86

Displaying genes 1421 – 1430 of 13072 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.