Chromobacterium vaccinii str. XC0014

Gram-negativeCocciMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium vaccinii str. XC0014 is a Gram-negative bacterium characterized by its coccoid shape and mobility, attributed to the presence of flagella. This species is classified as a facultatively anaerobe, enabling it to thrive in both aerobic and anaerobic environments. C. vaccinii str. XC0014 exhibits mesophilic growth, with an optimal temperature of 25°C, and it is capable of surviving within a temperature range suitable for mesophiles. The organism features a unique cellular structure with two membranes and a single replicon, which is indicative of its classification within the Proteobacteria phylum. It is important to note that the bacterium's habitat is described as multiple, suggesting it can inhabit various ecological niches, although specific environments are not detailed. The ecological role of Chromobacterium vaccinii str. XC0014 may be linked to its versatility in oxygen utilization and its ability to thrive in diverse habitats. Its mobility and flagellar presence could facilitate its movement within these environments, potentially influencing interactions with other microorganisms or contributing to nutrient cycling processes. The ability to adapt to varying oxygen levels may also provide a competitive advantage in fluctuating ecological conditions. Understanding such traits can offer insights into the ecological dynamics where this bacterium is present. The genome of C. vaccinii str. XC0014 is accessible under the accession number NZ_CP022344.1, providing a resource for further research and exploration of its biological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium vaccinii
StrainXC0014

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Chromobacterium vaccinii str. XC0014
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium vaccinii strain XC0014 chromosome, complete

Gene Summary

Adenine Count

880656 bp

Thymine Count

881830 bp

Guanine Count

1587801 bp

Cytosine Count

1589368 bp

Genome Length

4939655 bp

Protein-coding Genes

4382 genes

Non-Coding Genes

304 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated helicase cas3'CFN79_RS11260Not AvailablePositive2363620 - 236629298377.8
type i-e crispr-associated protein cse1/casaCFN79_RS11265Not AvailablePositive2366379 - 236796258554.5
type i-e crispr-associated protein cse2/casbCFN79_RS11270Not AvailablePositive2367943 - 236853022070.4
type i-e crispr-associated protein cas7/cse4/cascCFN79_RS11275Not AvailablePositive2368550 - 236960238054.3
type i-e crispr-associated protein cas5/casdCFN79_RS11280Not AvailablePositive2369607 - 237036828325.7
type i-e crispr-associated protein cas6/cse3/caseCFN79_RS11285Not AvailablePositive2370365 - 237106926071.4
type i-e crispr-associated endonuclease cas1eCFN79_RS11290Not AvailablePositive2371066 - 237198333541.5
type i-e crispr-associated endoribonuclease cas2eCFN79_RS11295Not AvailablePositive2371964 - 237226611182.4
mase1 domain-containing proteinCFN79_RS11300Not AvailablePositive2373855 - 237512944902.8
acyl-coa-binding proteinCFN79_RS11305Not AvailablePositive2375122 - 237660054099.3

Displaying genes 2361 – 2370 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.