Chromobacterium vaccinii str. XC0014

Gram-negativeCocciMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Chromobacteriaceae

Genus

Chromobacterium

Description

Chromobacterium vaccinii str. XC0014 is a Gram-negative bacterium characterized by its coccoid shape and mobility, attributed to the presence of flagella. This species is classified as a facultatively anaerobe, enabling it to thrive in both aerobic and anaerobic environments. C. vaccinii str. XC0014 exhibits mesophilic growth, with an optimal temperature of 25°C, and it is capable of surviving within a temperature range suitable for mesophiles. The organism features a unique cellular structure with two membranes and a single replicon, which is indicative of its classification within the Proteobacteria phylum. It is important to note that the bacterium's habitat is described as multiple, suggesting it can inhabit various ecological niches, although specific environments are not detailed. The ecological role of Chromobacterium vaccinii str. XC0014 may be linked to its versatility in oxygen utilization and its ability to thrive in diverse habitats. Its mobility and flagellar presence could facilitate its movement within these environments, potentially influencing interactions with other microorganisms or contributing to nutrient cycling processes. The ability to adapt to varying oxygen levels may also provide a competitive advantage in fluctuating ecological conditions. Understanding such traits can offer insights into the ecological dynamics where this bacterium is present. The genome of C. vaccinii str. XC0014 is accessible under the accession number NZ_CP022344.1, providing a resource for further research and exploration of its biological functions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyChromobacteriaceae
GenusChromobacterium
SpeciesChromobacterium vaccinii
StrainXC0014

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Chromobacterium vaccinii str. XC0014
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chromobacterium vaccinii str. XC0014


Gene Summary

Adenine Count

880656 bp

Thymine Count

881830 bp

Guanine Count

1587801 bp

Cytosine Count

1589368 bp

Genome Length

4939655 bp

Protein-coding Genes

4382 genes

Non-Coding Genes

304 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseCFN79_RS03860Not AvailablePositive823250 - 82407129439.2
abc transporter atp-binding proteinCFN79_RS03865Not AvailablePositive824390 - 82520829385.8
lipid asymmetry maintenance abc transporter permease subunit mlaeCFN79_RS03870Not AvailablePositive825201 - 82598627558.7
outer membrane lipid asymmetry maintenance protein mladCFN79_RS03875Not AvailablePositive825998 - 82646516383.9
phospholipid-binding protein mlacCFN79_RS03880Not AvailablePositive826537 - 82716922644.3
lipid asymmetry maintenance protein mlabCFN79_RS03885Not AvailablePositive827169 - 8274569288.29
vacj family lipoproteinCFN79_RS03890Not AvailablePositive827459 - 82827729215.3
zinc ribbon domain-containing protein yjdmCFN79_RS03895Not AvailablePositive828352 - 82869011994.3
transporter substrate-binding domain-containing proteinCFN79_RS03900Not AvailablePositive828793 - 82955127700.5
udp-n-acetylglucosamine 1-carboxyvinyltransferaseCFN79_RS03905Not AvailableNegative829634 - 83088744472.6

Displaying genes 991 – 1000 of 4686 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.