Gordonia rhizosphera NBRC 16068

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia rhizosphera NBRC 16068 is a mesophilic bacterium characterized by the presence of flagella, which contributes to its motility. The optimal growth temperature for this species is 29°C, indicating a preference for moderate thermal conditions. The organism possesses a single replicon, which is relevant for its genetic stability and replication processes. The accession number for Gordonia rhizosphera is BAHC00000000.1, which provides a reference for genomic studies and further taxonomic identification. In terms of ecological significance, the presence of flagella suggests that Gordonia rhizosphera may play a role in soil ecosystems, where motility can enhance its ability to colonize diverse microhabitats and interact with other microorganisms. Its mesophilic nature implies that it thrives in environments where temperatures are moderate, potentially contributing to nutrient cycling and organic matter decomposition in terrestrial ecosystems. Understanding the biology and ecology of Gordonia rhizosphera can offer insights into its role in soil health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia rhizosphera
StrainNBRC 16068

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia rhizosphera NBRC 16068 DNA, contig: GORHZ261, whole

Gene Summary

Adenine Count

1062651 bp

Thymine Count

1060795 bp

Guanine Count

2150854 bp

Cytosine Count

2160690 bp

Genome Length

6434991 bp

Protein-coding Genes

5930 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diaminobutyrate--2-oxoglutarate transaminaseGORHZ_032_00140Not AvailablePositive598710 - 59998145563.9
l-ectoine synthaseGORHZ_032_00150Not AvailablePositive599978 - 60041515780.7
nad-dependent deacetylaseGORHZ_032_00160Not AvailablePositive600444 - 60136733532.2
glutamate 5-kinaseGORHZ_032_00170Not AvailableNegative601340 - 60245538650.0
gtp-binding protein obgGORHZ_032_00180Not AvailableNegative602452 - 60392752152.9
50s ribosomal protein l27GORHZ_032_00190Not AvailableNegative604022 - 6042859164.96
50s ribosomal protein l21GORHZ_032_00200Not AvailableNegative604322 - 60463311167.7
putative ribonucleaseGORHZ_032_00210Not AvailableNegative604938 - 608309119590.0
nucleoside diphosphate kinaseGORHZ_032_00220Not AvailableNegative608736 - 60915814945.0
hypothetical proteinGORHZ_032_00230Not AvailableNegative609208 - 60963914733.6

Displaying genes 561 – 570 of 5979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.