Gordonia rhizosphera NBRC 16068

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia rhizosphera NBRC 16068 is a mesophilic bacterium characterized by the presence of flagella, which contributes to its motility. The optimal growth temperature for this species is 29°C, indicating a preference for moderate thermal conditions. The organism possesses a single replicon, which is relevant for its genetic stability and replication processes. The accession number for Gordonia rhizosphera is BAHC00000000.1, which provides a reference for genomic studies and further taxonomic identification. In terms of ecological significance, the presence of flagella suggests that Gordonia rhizosphera may play a role in soil ecosystems, where motility can enhance its ability to colonize diverse microhabitats and interact with other microorganisms. Its mesophilic nature implies that it thrives in environments where temperatures are moderate, potentially contributing to nutrient cycling and organic matter decomposition in terrestrial ecosystems. Understanding the biology and ecology of Gordonia rhizosphera can offer insights into its role in soil health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia rhizosphera
StrainNBRC 16068

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia rhizosphera NBRC 16068 DNA, contig: GORHZ261, whole

Gene Summary

Adenine Count

1062651 bp

Thymine Count

1060795 bp

Guanine Count

2150854 bp

Cytosine Count

2160690 bp

Genome Length

6434991 bp

Protein-coding Genes

5930 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isopentenyl-diphosphate delta-isomeraseGORHZ_217_00250Not AvailablePositive5753310 - 575385820210.8
phytoene synthaseGORHZ_217_00260Not AvailablePositive5753876 - 575477232654.4
putative phytoene dehydrogenaseGORHZ_217_00270Not AvailablePositive5754769 - 575641859518.4
putative phytoene dehydrogenaseGORHZ_217_00280Not AvailableNegative5756428 - 575792152846.3
putative glycosyltransferaseGORHZ_217_00290Not AvailableNegative5757918 - 575906640167.6
hypothetical proteinGORHZ_217_00300Not AvailableNegative5759050 - 575990429949.0
putative monooxygenaseGORHZ_217_00310Not AvailableNegative5759904 - 576059325469.4
lycopene cyclaseGORHZ_217_00320Not AvailablePositive5760693 - 576108514183.2
lycopene cyclaseGORHZ_217_00330Not AvailablePositive5761085 - 576146214137.2
putative polyprenyl synthaseGORHZ_217_00340Not AvailableNegative5761453 - 576256839994.5

Displaying genes 5371 – 5380 of 5979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.