Gordonia rhizosphera NBRC 16068

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia rhizosphera NBRC 16068 is a mesophilic bacterium characterized by the presence of flagella, which contributes to its motility. The optimal growth temperature for this species is 29°C, indicating a preference for moderate thermal conditions. The organism possesses a single replicon, which is relevant for its genetic stability and replication processes. The accession number for Gordonia rhizosphera is BAHC00000000.1, which provides a reference for genomic studies and further taxonomic identification. In terms of ecological significance, the presence of flagella suggests that Gordonia rhizosphera may play a role in soil ecosystems, where motility can enhance its ability to colonize diverse microhabitats and interact with other microorganisms. Its mesophilic nature implies that it thrives in environments where temperatures are moderate, potentially contributing to nutrient cycling and organic matter decomposition in terrestrial ecosystems. Understanding the biology and ecology of Gordonia rhizosphera can offer insights into its role in soil health and microbial community dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia rhizosphera
StrainNBRC 16068

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia rhizosphera NBRC 16068 DNA, contig: GORHZ261, whole

Gene Summary

Adenine Count

1062651 bp

Thymine Count

1060795 bp

Guanine Count

2150854 bp

Cytosine Count

2160690 bp

Genome Length

6434991 bp

Protein-coding Genes

5930 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinGORHZ_192_00020Not AvailableNegative5110484 - 511216959000.8
protein-export membrane protein secfGORHZ_192_00030Not AvailableNegative5112166 - 511342544820.9
protein-export membrane protein secdGORHZ_192_00040Not AvailableNegative5113422 - 511503257223.0
protein-export membrane protein yajcGORHZ_192_00050Not AvailableNegative5115199 - 511560614793.3
holliday junction atp-dependent dna helicase ruvbGORHZ_192_00060Not AvailableNegative5115815 - 511689138190.9
holliday junction atp-dependent dna helicase ruvaGORHZ_192_00070Not AvailableNegative5116904 - 511750320393.9
crossover junction endodeoxyribonuclease ruvcGORHZ_192_00080Not AvailableNegative5117500 - 511814122362.9
hypothetical proteinGORHZ_192_00090Not AvailablePositive5118274 - 511888222131.3
putative transcriptional regulatorGORHZ_192_00100Not AvailableNegative5118899 - 511965126654.0
glutamine amidotransferase subunit pdxtGORHZ_192_00110Not AvailableNegative5119710 - 512034222671.1

Displaying genes 4761 – 4770 of 5979 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.