Gordonia otitidis NBRC 100426

sphereaerobic / microaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia otitidis NBRC 100426 is a Gram-positive, aerobic to microaerophilic bacterium characterized by its spherical shape. This species is non-motile and possesses true flagella, although it does not utilize them for movement. Gordonia otitidis thrives optimally at a temperature of 29°C, indicating its mesophilic nature, which allows it to survive within a moderate temperature range conducive to bacterial growth. The organism is notable for having a single replicon, which is a characteristic feature that can influence its genetic stability and replication processes. The strain is cataloged under the accession number BAFB00000000.1, which provides a reference for further genetic and microbiological studies. From a biological and ecological perspective, the presence of Gordonia otitidis in various environments may suggest its role in the degradation of complex organic compounds, particularly in habitats where aerobic conditions are prevalent. Its mesophilic growth preference aligns with typical environmental temperatures found in soil and water, potentially facilitating its involvement in biogeochemical cycles. Understanding the traits of Gordonia otitidis can contribute to insights into microbial ecology and the functions of bacteria in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia otitidis
StrainNBRC 100426

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Gordonia otitidis NBRC 100426
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic / microaerophile
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia otitidis NBRC 100426 DNA, contig: GOOTI273, whole genome

Gene Summary

Adenine Count

913945 bp

Thymine Count

917299 bp

Guanine Count

1735993 bp

Cytosine Count

1728657 bp

Genome Length

5295895 bp

Protein-coding Genes

4936 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction atp-dependent dna helicase ruvaGOOTI_144_00030Not AvailablePositive3152375 - 315296820493.0
holliday junction atp-dependent dna helicase ruvbGOOTI_144_00040Not AvailablePositive3152968 - 315405038174.8
preprotein translocase yajc subunitGOOTI_144_00050Not AvailablePositive3154221 - 315465815690.5
protein-export membrane protein secdGOOTI_144_00060Not AvailablePositive3154918 - 315664261184.1
protein-export membrane protein secfGOOTI_144_00070Not AvailablePositive3156639 - 315782942671.5
hypothetical proteinGOOTI_144_00080Not AvailablePositive3157838 - 315952058655.9
adenine phosphoribosyltransferaseGOOTI_144_00090Not AvailablePositive3159524 - 316011720065.1
gtp pyrophosphokinase/guanosine-3',5'-bis (diphosphate) 3-pyrophosphohydrolaseGOOTI_144_00100Not AvailablePositive3160274 - 316271289535.1
putative peptidyl-prolyl cis-trans isomeraseGOOTI_144_00110Not AvailableNegative3162972 - 316391633674.7
hypothetical proteinGOOTI_144_00120Not AvailablePositive3164119 - 316483825027.6

Displaying genes 2941 – 2950 of 4997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.