Rickettsia amblyommatis str. GAT-30V

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rickettsiales

Family

Rickettsiaceae

Genus

Rickettsia

Description

Rickettsia amblyommatis str. GAT-30V is a bacterium classified within the genus Rickettsia, known for its role as an obligate intracellular pathogen. One of its key traits is the presence of flagella, which may contribute to its motility, although the specific functional implications of this characteristic in Rickettsia species are not fully understood. Rickettsia amblyommatis str. GAT-30V possesses a total of four replicons, indicating a complex genomic structure that may allow for diverse regulatory and metabolic functions. The genomic data for Rickettsia amblyommatis str. GAT-30V is accessible through several accession numbers: NC_017021.1, NC_017020.1, NC_017028.1, and NC_017029.1. These sequences provide a foundation for further research into the genetic and functional attributes of this strain. Ecologically, Rickettsia amblyommatis is associated with the Amblyomma genus of ticks, which serve as vectors for this bacterium. Understanding the relationship between Rickettsia amblyommatis and its tick hosts is crucial for comprehending its epidemiology and potential impact on public health. The presence of multiple replicons in its genome may also suggest adaptations that enhance survival and transmission within these vectors, highlighting the intricate interactions between pathogens and their hosts in ecological systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRickettsiales
FamilyRickettsiaceae
GenusRickettsia
SpeciesRickettsia amblyommatis
StrainGAT-30V

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rickettsia amblyommatis str. GAT-30V plasmid pMCE_1, complete

Gene Summary

Adenine Count

10226 bp

Thymine Count

10885 bp

Guanine Count

4995 bp

Cytosine Count

5868 bp

Genome Length

31974 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alanine--trna ligaseMCE_RS00225Not AvailablePositive37275 - 3991199197.9
trna pseudouridine(38-40) synthase truaMCE_RS00230Not AvailableNegative40120 - 4085727655.3
jab domain-containing proteinMCE_RS00235Not AvailableNegative40965 - 4287069831.6
dna primaseMCE_RS00240Not AvailableNegative42915 - 4470268421.0
diacylglycerol/polyprenol kinase family proteinMCE_RS00245Not AvailableNegative44707 - 4532122760.6
transcription elongation factor greaMCE_RS00250Not AvailablePositive45588 - 4607618279.7
nad(p) transhydrogenase subunit alphaMCE_RS00255Not AvailableNegative46235 - 4663314335.8
nad(p) transhydrogenase subunit alphaMCE_RS00260Not AvailableNegative46630 - 4775440503.3
outer-membrane lipoprotein carrier protein lolaMCE_RS00265Not AvailablePositive47830 - 4846824877.0
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive48489 - 48582Not Available

Displaying genes 141 – 150 of 1685 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.