Pyrobaculum ferrireducens str. 1860

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Thermoproteales

Family

Thermoproteaceae

Genus

Pyrobaculum

Description

Pyrobaculum ferrireducens strain 1860 is a hyperthermophilic archaeon notable for its unique metabolic capabilities. This organism possesses a single replicon, which is indicative of its streamlined genetic architecture. The presence of flagella suggests that P. ferrireducens is motile, which may play a role in its ecological interactions and adaptation in extreme thermal environments. The strain is characterized by its ability to reduce ferric iron, which positions it as a key player in biogeochemical cycles involving iron in high-temperature habitats, such as hydrothermal vents. This metabolic capability allows P. ferrireducens to exploit available electron acceptors in environments where oxygen is scarce, thereby contributing to the cycling of iron and potentially influencing the microbial community structure in its native habitat. The genomic information associated with P. ferrireducens is cataloged under the accession number NC_016645.1, providing a resource for further investigation into its genetics and physiology. The study of this archaeon can enhance our understanding of microbial life in extreme conditions and the evolutionary adaptations that facilitate survival in such niches. Overall, Pyrobaculum ferrireducens str. 1860 exemplifies the diverse metabolic strategies employed by extremophiles and their ecological significance in high-temperature environments.

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderThermoproteales
FamilyThermoproteaceae
GenusPyrobaculum
SpeciesPyrobaculum ferrireducens
Strain1860

Profile

Physiology
Gram staining propertiesNa
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrobaculum ferrireducens, complete sequence.

Gene Summary

Adenine Count

531445 bp

Thymine Count

530602 bp

Guanine Count

713321 bp

Cytosine Count

692604 bp

Genome Length

2467972 bp

Protein-coding Genes

2796 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marc family proteinP186_RS11180Not AvailableNegative1991871 - 199246420588.2
fructose-1,6-bisphosphate aldolase/phosphataseP186_RS11190Not AvailableNegative1992866 - 199406544376.6
gnat family n-acetyltransferaseP186_RS11195Not AvailablePositive1994111 - 199456617252.0
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitP186_RS11200Not AvailablePositive1994599 - 199568139515.8
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunitP186_RS11205Not AvailablePositive1995668 - 1998745113131.0
rimk family alpha-l-glutamate ligaseP186_RS11210Not AvailablePositive1998739 - 199953328624.9
air synthase family proteinP186_RS11215Not AvailableNegative1999520 - 200049734264.7
aminotransferaseP186_RS11220Not AvailablePositive2000522 - 200140032917.3
duf99 family proteinP186_RS11225Not AvailablePositive2001414 - 200199821404.7
spermidine/putrescine abc transporter substrate-binding proteinP186_RS11230Not AvailablePositive2001971 - 200315843524.1

Displaying genes 2311 – 2320 of 2830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

250 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 250 metabolites

Health Effects

No health effects information available for this bacterium.