Xanthomonas axonopodis pv. commiphoreae str. LMG26789

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas axonopodis pv. commiphoreae str. LMG26789 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This strain has a single replicon, indicating a streamlined genomic structure that may be advantageous for its adaptability and survival. The strain is cataloged with the GenBank accession number NZ_CP031060.1, which provides a reference for further genomic and taxonomic studies. The rod shape and flagellar presence suggest that X. axonopodis pv. commiphoreae str. LMG26789 may be well-suited for colonization in various environments, potentially allowing it to thrive in diverse ecological niches. In terms of its biological and ecological relevance, the attributes of Xanthomonas axonopodis pv. commiphoreae str. LMG26789 may play a significant role in its interactions with host plants, particularly in relation to plant disease mechanisms. Understanding the traits of this bacterium could inform strategies for managing plant health and mitigating the impact of diseases caused by Xanthomonas species.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas axonopodis
Strainpv. commiphoreae LMG26789

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas axonopodis pv. commiphoreae str. LMG26789
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas axonopodis pv. commiphoreae str. LMG26789


Gene Summary

Adenine Count

6808 bp

Thymine Count

6463 bp

Guanine Count

11081 bp

Cytosine Count

11054 bp

Genome Length

35406 bp

Protein-coding Genes

46 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic murein transglycosylaseXcom_RS21280Not AvailableNegative93 - 137046186.4
hypothetical proteinXcom_RS21285Not AvailableNegative1506 - 4494108665.0
site-specific integraseXcom_RS21290Not AvailableNegative4502 - 577646712.9
dna-binding proteinXcom_RS21295Not AvailablePositive5960 - 701539584.3
xopaf/avrxv3 family type iii secretion system effectorXcom_RS21300Not AvailablePositive7405 - 799521402.2
transposaseXcom_RS21640Not AvailableNegative8116 - 83167605.15
is66 family insertion sequence element accessory protein tnpbXcom_RS21305Not AvailableNegative8505 - 87779674.91
is66 family insertion sequence element accessory protein tnpaXcom_RS21310Not AvailableNegative8771 - 907310921.3
hypothetical proteinXcom_RS21320Not AvailablePositive9240 - 94477619.04
type iii secretion system effector avirulence protein avrbs3Xcom_RS21325Not AvailableNegative9558 - 12539105051.0

Displaying genes 1 – 10 of 46 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.