Limnohabitans sp. Rim8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Rim8 is a distinct microbial species characterized by having a single replicon. This trait suggests a streamlined genomic architecture, which can influence its adaptability and functionality within aquatic environments. The complete genome of Limnohabitans sp. Rim8 is available under the accession number NESO00000000.1, which provides a basis for further genomic studies and comparative analyses with other related microorganisms. The genus Limnohabitans is known for its presence in freshwater ecosystems, where it plays a significant role in nutrient cycling and the degradation of organic matter. The specific ecological niche of Limnohabitans sp. Rim8 may contribute to the overall health and functioning of freshwater habitats, potentially influencing microbial community dynamics. Biologically, the presence of a single replicon might indicate an evolutionary strategy that favors rapid growth and reproduction under certain environmental conditions. This trait could be advantageous in fluctuating aquatic environments, where efficient resource utilization is critical for survival. Understanding the genomic and ecological traits of Limnohabitans sp. Rim8 can provide insights into its role in freshwater ecosystems and its potential applications in bioremediation or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Rim8
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Rim8 LimA-Rim8-C25, whole genome shotgun

Gene Summary

Adenine Count

646292 bp

Thymine Count

618446 bp

Guanine Count

774153 bp

Cytosine Count

819694 bp

Genome Length

2858585 bp

Protein-coding Genes

2737 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
anhydro-n-acetylmuramic acid kinaseB9Z36_03220Not AvailablePositive613018 - 61414539262.9
iron-sulfur cluster insertion protein erpaB9Z36_03225Not AvailableNegative614146 - 61451112909.0
30s ribosomal protein s9B9Z36_03230Not AvailableNegative614670 - 61506214256.2
50s ribosomal protein l13B9Z36_03235Not AvailableNegative615072 - 61550015549.0
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjB9Z36_03240Not AvailablePositive615710 - 61658831976.6
methylenetetrahydrofolate reductaseB9Z36_03245Not AvailableNegative616649 - 61748829817.6
hemolysinB9Z36_03250Not AvailableNegative617511 - 61826627014.5
adenosylhomocysteinaseB9Z36_03255Not AvailableNegative618286 - 61971951905.2
peptide chain release factor 3B9Z36_03260Not AvailablePositive620010 - 62164160225.5
excinuclease abc subunit aB9Z36_03265Not AvailableNegative621884 - 627874217340.0

Displaying genes 641 – 650 of 2788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.