Limnohabitans sp. Rim8

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. Rim8 is a distinct microbial species characterized by having a single replicon. This trait suggests a streamlined genomic architecture, which can influence its adaptability and functionality within aquatic environments. The complete genome of Limnohabitans sp. Rim8 is available under the accession number NESO00000000.1, which provides a basis for further genomic studies and comparative analyses with other related microorganisms. The genus Limnohabitans is known for its presence in freshwater ecosystems, where it plays a significant role in nutrient cycling and the degradation of organic matter. The specific ecological niche of Limnohabitans sp. Rim8 may contribute to the overall health and functioning of freshwater habitats, potentially influencing microbial community dynamics. Biologically, the presence of a single replicon might indicate an evolutionary strategy that favors rapid growth and reproduction under certain environmental conditions. This trait could be advantageous in fluctuating aquatic environments, where efficient resource utilization is critical for survival. Understanding the genomic and ecological traits of Limnohabitans sp. Rim8 can provide insights into its role in freshwater ecosystems and its potential applications in bioremediation or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. Rim8
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. Rim8 LimA-Rim8-C25, whole genome shotgun

Gene Summary

Adenine Count

646292 bp

Thymine Count

618446 bp

Guanine Count

774153 bp

Cytosine Count

819694 bp

Genome Length

2858585 bp

Protein-coding Genes

2737 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bcr/cfla family drug resistance efflux transporterB9Z36_06850Not AvailablePositive1399651 - 140083841858.4
trna (adenosine(37)-n6)-dimethylallyltransferase miaaB9Z36_06855Not AvailablePositive1400849 - 140183235473.9
hypothetical proteinB9Z36_06860Not AvailableNegative1401813 - 140227416714.8
adp-ribose pyrophosphataseB9Z36_06865Not AvailableNegative1402317 - 140290422271.4
nadh-quinone oxidoreductase subunit nB9Z36_06870Not AvailableNegative1402953 - 140444052321.1
nadh-quinone oxidoreductase subunit mB9Z36_06875Not AvailableNegative1404455 - 140593353823.4
nadh-quinone oxidoreductase subunit lB9Z36_06880Not AvailableNegative1405946 - 140797374328.5
nadh-quinone oxidoreductase subunit kB9Z36_06885Not AvailableNegative1407980 - 140828811143.1
nadh:ubiquinone oxidoreductase subunit jB9Z36_06890Not AvailableNegative1408285 - 140904026571.0
nadh-quinone oxidoreductase subunit iB9Z36_06895Not AvailableNegative1409052 - 140956419480.3

Displaying genes 1361 – 1370 of 2788 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.