Limnohabitans sp. 15K

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. 15K is a bacterial strain characterized by having a single replicon, indicating a streamlined genomic organization. This trait can be advantageous for its adaptability and efficiency in utilizing resources in its environment. The genomic information for Limnohabitans sp. 15K is cataloged under the accession number NESM00000000.1, which facilitates its identification and further study within microbial databases. The classification of this organism as a member of the Limnohabitans genus suggests that it is likely adapted to freshwater environments, where members of this genus are typically found. While specific metabolic pathways and ecological roles of Limnohabitans sp. 15K are not detailed, its presence in aquatic ecosystems may contribute to nutrient cycling and potentially influence microbial community dynamics. In particular, members of the Limnohabitans genus are known for their ability to degrade organic materials, which may play a role in maintaining the health of freshwater habitats. Overall, the unique genomic characteristic of having a single replicon may reflect an evolutionary adaptation to its ecological niche, allowing Limnohabitans sp. 15K to thrive in the complex and variable conditions often found in freshwater ecosystems. Understanding such traits is crucial for elucidating the ecological roles of microbial communities in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. 15K
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. 15K LimC-15K-C15, whole genome shotgun sequence.

Gene Summary

Adenine Count

750903 bp

Thymine Count

734424 bp

Guanine Count

1025942 bp

Cytosine Count

1042140 bp

Genome Length

3553409 bp

Protein-coding Genes

3256 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l13B9Z40_11630Not AvailablePositive2482080 - 248251115708.2
30s ribosomal protein s9B9Z40_11635Not AvailablePositive2482523 - 248291514404.4
iron-sulfur cluster insertion protein erpaB9Z40_11640Not AvailablePositive2483105 - 248347012924.1
anhydro-n-acetylmuramic acid kinaseB9Z40_11645Not AvailableNegative2483504 - 248464339995.6
peptidase m23B9Z40_11650Not AvailableNegative2484739 - 248620552715.9
tyrosine--trna ligaseB9Z40_11655Not AvailablePositive2486350 - 248758244926.5
cation diffusion facilitator family transporterB9Z40_11660Not AvailablePositive2487632 - 248855833722.1
d-tyrosyl-trna(tyr) deacylaseB9Z40_11665Not AvailablePositive2488555 - 248899815521.0
atp-dependent rna helicase dbpaB9Z40_11670Not AvailablePositive2489036 - 249045750875.5
rrna maturation rnase ybeyB9Z40_11675Not AvailableNegative2490791 - 249124616708.9

Displaying genes 2361 – 2370 of 3375 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.