Limnohabitans sp. 15K

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Limnohabitans

Description

Limnohabitans sp. 15K is a bacterial strain characterized by having a single replicon, indicating a streamlined genomic organization. This trait can be advantageous for its adaptability and efficiency in utilizing resources in its environment. The genomic information for Limnohabitans sp. 15K is cataloged under the accession number NESM00000000.1, which facilitates its identification and further study within microbial databases. The classification of this organism as a member of the Limnohabitans genus suggests that it is likely adapted to freshwater environments, where members of this genus are typically found. While specific metabolic pathways and ecological roles of Limnohabitans sp. 15K are not detailed, its presence in aquatic ecosystems may contribute to nutrient cycling and potentially influence microbial community dynamics. In particular, members of the Limnohabitans genus are known for their ability to degrade organic materials, which may play a role in maintaining the health of freshwater habitats. Overall, the unique genomic characteristic of having a single replicon may reflect an evolutionary adaptation to its ecological niche, allowing Limnohabitans sp. 15K to thrive in the complex and variable conditions often found in freshwater ecosystems. Understanding such traits is crucial for elucidating the ecological roles of microbial communities in these environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusLimnohabitans
SpeciesLimnohabitans sp. 15K
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limnohabitans sp. 15K LimC-15K-C15, whole genome shotgun sequence.

Gene Summary

Adenine Count

750903 bp

Thymine Count

734424 bp

Guanine Count

1025942 bp

Cytosine Count

1042140 bp

Genome Length

3553409 bp

Protein-coding Genes

3256 genes

Non-Coding Genes

119 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfur oxidation c-type cytochrome soxaB9Z40_08985Not AvailableNegative1909661 - 191045228925.6
thiosulfate oxidation carrier complex protein soxzB9Z40_08990Not AvailableNegative1910449 - 191076311507.9
hypothetical proteinB9Z40_08995Not AvailableNegative1910768 - 191121115940.3
sulfur oxidation c-type cytochrome soxxB9Z40_09000Not AvailableNegative1911216 - 191168016197.8
aldehyde dehydrogenaseB9Z40_09005Not AvailableNegative1911658 - 191384177833.6
(2fe-2s)-binding proteinB9Z40_09010Not AvailableNegative1913853 - 191431116139.7
Trna-valNot AvailableNot AvailablePositive1914529 - 1914605Not Available
gtp pyrophosphokinaseB9Z40_09020Not AvailableNegative1914670 - 191691682064.5
alpha/beta hydrolaseB9Z40_09025Not AvailableNegative1916957 - 191789533919.7
3-hydroxybutyrate dehydrogenaseB9Z40_09030Not AvailablePositive1917998 - 191876826669.2

Displaying genes 1881 – 1890 of 3375 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.