Clavibacter nebraskensis NCPPB 2581

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter nebraskensis NCPPB 2581 is a Gram-positive, rod-shaped bacterium characterized by the presence of flagella. This motility structure may provide advantages in its ecological niche, potentially aiding in its movement through various environments. The bacterium possesses a single replicon, which is significant in understanding its genomic organization and replication mechanisms. The accession number for Clavibacter nebraskensis NCPPB 2581 is NC_020891.1, indicating that its genetic information is documented in a public database, allowing for further study and comparison with other microbial species. The Gram-positive nature of this bacterium suggests that it has a thick peptidoglycan layer, which is characteristic of this group and may contribute to its resilience in certain conditions. In terms of ecological insights, the presence of flagella indicates that Clavibacter nebraskensis NCPPB 2581 could occupy a variety of habitats, potentially including soil or plant environments where motility might be advantageous for colonization or nutrient acquisition. Understanding its motility and genetic structure could offer information on its role in microbial communities and its interactions with other organisms in its ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter nebraskensis
StrainNCPPB 2581

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Clavibacter nebraskensis NCPPB 2581
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter nebraskensis NCPPB 2581, complete sequence.

Gene Summary

Adenine Count

411061 bp

Thymine Count

415985 bp

Guanine Count

1119225 bp

Cytosine Count

1117325 bp

Genome Length

3063596 bp

Protein-coding Genes

2898 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s8 family serine peptidaseCMN_RS02215Not AvailableNegative454687 - 45652861676.1
hypothetical proteinCMN_RS02220Not AvailableNegative456867 - 45739118096.6
tetr family transcriptional regulatorCMN_RS02225Not AvailablePositive457522 - 45824725941.8
phospholipase domain-containing proteinCMN_RS15525Not AvailableNegative458315 - 45897723972.2
30s ribosomal protein s6CMN_RS15530Not AvailableNegative459149 - 46070154165.2
alpha-ketoglutarate-dependent dioxygenase alkbCMN_RS02235Not AvailableNegative460757 - 46138922868.3
pr6pr family membrane proteinCMN_RS02240Not AvailableNegative461454 - 46213424117.9
biotin/lipoate a/b protein ligase family proteinCMN_RS02245Not AvailablePositive462213 - 46326238062.1
gnat family n-acetyltransferaseCMN_RS02250Not AvailableNegative463521 - 46380510444.2
amidase domain-containing proteinCMN_RS02255Not AvailablePositive463909 - 46480531494.7

Displaying genes 451 – 460 of 2952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.