Clavibacter nebraskensis NCPPB 2581

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter nebraskensis NCPPB 2581 is a Gram-positive, rod-shaped bacterium characterized by the presence of flagella. This motility structure may provide advantages in its ecological niche, potentially aiding in its movement through various environments. The bacterium possesses a single replicon, which is significant in understanding its genomic organization and replication mechanisms. The accession number for Clavibacter nebraskensis NCPPB 2581 is NC_020891.1, indicating that its genetic information is documented in a public database, allowing for further study and comparison with other microbial species. The Gram-positive nature of this bacterium suggests that it has a thick peptidoglycan layer, which is characteristic of this group and may contribute to its resilience in certain conditions. In terms of ecological insights, the presence of flagella indicates that Clavibacter nebraskensis NCPPB 2581 could occupy a variety of habitats, potentially including soil or plant environments where motility might be advantageous for colonization or nutrient acquisition. Understanding its motility and genetic structure could offer information on its role in microbial communities and its interactions with other organisms in its ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter nebraskensis
StrainNCPPB 2581

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Clavibacter nebraskensis NCPPB 2581
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter nebraskensis NCPPB 2581, complete sequence.

Gene Summary

Adenine Count

411061 bp

Thymine Count

415985 bp

Guanine Count

1119225 bp

Cytosine Count

1117325 bp

Genome Length

3063596 bp

Protein-coding Genes

2898 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent oxidoreductaseCMN_RS10160Not AvailableNegative2162261 - 216328035627.1
nmra family nad(p)-binding proteinCMN_RS10165Not AvailableNegative2163446 - 216439033402.5
30s ribosomal protein s6CMN_RS15335Not AvailableNegative2164695 - 216500310925.7
sdr family oxidoreductaseCMN_RS10175Not AvailableNegative2165103 - 216579524225.8
hypothetical proteinCMN_RS10180Not AvailablePositive2165925 - 216627513338.8
hsp20/alpha crystallin family proteinCMN_RS10185Not AvailablePositive2166398 - 216685616635.7
gnat family n-acetyltransferaseCMN_RS10190Not AvailableNegative2166931 - 216943292384.1
lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family proteinCMN_RS10195Not AvailableNegative2169429 - 217079950023.1
pyridoxal phosphate-dependent decarboxylase family proteinCMN_RS10200Not AvailableNegative2170796 - 217238556532.9
hypothetical proteinCMN_RS10205Not AvailablePositive2172597 - 217290810324.2

Displaying genes 2061 – 2070 of 2952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.