Pseudomonas putida B6-2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida B6-2 is a Gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. As a heterotroph, it utilizes organic compounds as its energy source, demonstrating versatility in nutrient acquisition. This species is characterized by its facultative anaerobic nature, allowing it to grow in both the presence and absence of oxygen. Pseudomonas putida B6-2 is motile, equipped with flagella that facilitate movement through its habitat. The bacterium has a mesophilic temperature range, indicating optimal growth at moderate temperatures, which aligns with typical environmental conditions found in soil and wastewater. Structurally, Pseudomonas putida B6-2 contains one replicon and is surrounded by two membranes, a characteristic feature of Gram-negative bacteria. This arrangement plays a significant role in its physiology and interactions with the environment. The biotic relationship of Pseudomonas putida B6-2 is classified as free-living, suggesting that it does not rely on a host organism for survival. This independence allows it to play an essential role in nutrient cycling within its ecosystems. Given its adaptability and metabolic capabilities, Pseudomonas putida B6-2 may contribute significantly to bioremediation processes in contaminated environments, effectively breaking down pollutants and enhancing soil health. Its presence in wastewater treatment indicates its potential application in environmental biotechnology, underlining the ecological importance of this bacterium. The accession number for further genetic information is NZ_CP015202.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainB6-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida B6-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida B6-2 chromosome, complete genome.

Gene Summary

Adenine Count

1236367 bp

Thymine Count

1215279 bp

Guanine Count

1941870 bp

Cytosine Count

1983755 bp

Genome Length

6377271 bp

Protein-coding Genes

5604 genes

Non-Coding Genes

266 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseKKK_RS18745Not AvailableNegative4163376 - 416481852962.9
mbl fold metallo-hydrolase rna specificity domain-containing proteinKKK_RS18750Not AvailableNegative4165146 - 416657951966.5
lipopolysaccharide assembly protein lapa domain-containing proteinKKK_RS18755Not AvailableNegative4166682 - 41669459168.71
integration host factor subunit betaKKK_RS18760Not AvailableNegative4166967 - 416726311028.2
30s ribosomal protein s1KKK_RS18765Not AvailableNegative4167738 - 416941461559.2
(d)cmp kinaseKKK_RS18770Not AvailableNegative4169539 - 417022524692.7
bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferaseKKK_RS18775Not AvailableNegative4170222 - 417242978065.2
prephenate dehydrataseKKK_RS18780Not AvailableNegative4172621 - 417372440792.0
3-phosphoserine/phosphohydroxythreonine transaminaseKKK_RS18785Not AvailableNegative4173717 - 417480239927.4
dna gyrase subunit aKKK_RS18790Not AvailableNegative4175017 - 4177776101524.0

Displaying genes 3891 – 3900 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.