Pseudomonas putida B6-2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida B6-2 is a Gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. As a heterotroph, it utilizes organic compounds as its energy source, demonstrating versatility in nutrient acquisition. This species is characterized by its facultative anaerobic nature, allowing it to grow in both the presence and absence of oxygen. Pseudomonas putida B6-2 is motile, equipped with flagella that facilitate movement through its habitat. The bacterium has a mesophilic temperature range, indicating optimal growth at moderate temperatures, which aligns with typical environmental conditions found in soil and wastewater. Structurally, Pseudomonas putida B6-2 contains one replicon and is surrounded by two membranes, a characteristic feature of Gram-negative bacteria. This arrangement plays a significant role in its physiology and interactions with the environment. The biotic relationship of Pseudomonas putida B6-2 is classified as free-living, suggesting that it does not rely on a host organism for survival. This independence allows it to play an essential role in nutrient cycling within its ecosystems. Given its adaptability and metabolic capabilities, Pseudomonas putida B6-2 may contribute significantly to bioremediation processes in contaminated environments, effectively breaking down pollutants and enhancing soil health. Its presence in wastewater treatment indicates its potential application in environmental biotechnology, underlining the ecological importance of this bacterium. The accession number for further genetic information is NZ_CP015202.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainB6-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida B6-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida B6-2 chromosome, complete genome.

Gene Summary

Adenine Count

1236367 bp

Thymine Count

1215279 bp

Guanine Count

1941870 bp

Cytosine Count

1983755 bp

Genome Length

6377271 bp

Protein-coding Genes

5604 genes

Non-Coding Genes

266 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
saccharopine dehydrogenase family proteinKKK_RS13915Not AvailablePositive3055461 - 305670545398.0
class i sam-dependent methyltransferaseKKK_RS13920Not AvailableNegative3056850 - 305789637394.4
udp-glucose/gdp-mannose dehydrogenase family proteinKKK_RS13925Not AvailablePositive3058141 - 305947848687.5
nad-dependent epimerase/dehydratase family proteinKKK_RS13930Not AvailablePositive3059466 - 306044036130.4
glycosyltransferase family 2 proteinKKK_RS13935Not AvailablePositive3060475 - 306121827622.3
lipid-a-disaccharide synthase n-terminal domain-containing proteinKKK_RS13940Not AvailablePositive3061215 - 306148710559.2
glycosyltransferase family 39 proteinKKK_RS13945Not AvailablePositive3061492 - 306304858574.0
ribose-phosphate diphosphokinaseKKK_RS13950Not AvailablePositive3063220 - 306443842659.9
tigr03915 family putative dna repair proteinKKK_RS13955Not AvailablePositive3064429 - 306527732086.2
biotin-dependent carboxyltransferase family proteinKKK_RS13960Not AvailableNegative3065339 - 306631033937.0

Displaying genes 2911 – 2920 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.