Pseudomonas putida B6-2

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida B6-2 is a Gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. As a heterotroph, it utilizes organic compounds as its energy source, demonstrating versatility in nutrient acquisition. This species is characterized by its facultative anaerobic nature, allowing it to grow in both the presence and absence of oxygen. Pseudomonas putida B6-2 is motile, equipped with flagella that facilitate movement through its habitat. The bacterium has a mesophilic temperature range, indicating optimal growth at moderate temperatures, which aligns with typical environmental conditions found in soil and wastewater. Structurally, Pseudomonas putida B6-2 contains one replicon and is surrounded by two membranes, a characteristic feature of Gram-negative bacteria. This arrangement plays a significant role in its physiology and interactions with the environment. The biotic relationship of Pseudomonas putida B6-2 is classified as free-living, suggesting that it does not rely on a host organism for survival. This independence allows it to play an essential role in nutrient cycling within its ecosystems. Given its adaptability and metabolic capabilities, Pseudomonas putida B6-2 may contribute significantly to bioremediation processes in contaminated environments, effectively breaking down pollutants and enhancing soil health. Its presence in wastewater treatment indicates its potential application in environmental biotechnology, underlining the ecological importance of this bacterium. The accession number for further genetic information is NZ_CP015202.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
StrainB6-2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida B6-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas putida B6-2 chromosome, complete genome.

Gene Summary

Adenine Count

1236367 bp

Thymine Count

1215279 bp

Guanine Count

1941870 bp

Cytosine Count

1983755 bp

Genome Length

6377271 bp

Protein-coding Genes

5604 genes

Non-Coding Genes

266 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein tolqKKK_RS11050Not AvailableNegative2419066 - 241976125325.5
tol-pal system-associated acyl-coa thioesteraseKKK_RS11055Not AvailableNegative2419764 - 242021617206.2
holliday junction branch migration dna helicase ruvbKKK_RS11060Not AvailableNegative2420342 - 242138838538.4
holliday junction branch migration protein ruvaKKK_RS11065Not AvailableNegative2421385 - 242200222385.4
crossover junction endodeoxyribonuclease ruvcKKK_RS11070Not AvailableNegative2422112 - 242263618415.6
yebc/pmpr family dna-binding transcriptional regulatorKKK_RS11075Not AvailableNegative2422822 - 242356826843.3
aspartate--trna ligaseKKK_RS11080Not AvailableNegative2423683 - 242545866572.0
fmdb family zinc ribbon proteinKKK_RS11085Not AvailableNegative2425552 - 24257737921.5
ribbon-helix-helix domain-containing proteinKKK_RS11090Not AvailableNegative2425868 - 242619712227.9
dps family proteinKKK_RS11095Not AvailableNegative2426586 - 242705917804.3

Displaying genes 2321 – 2330 of 5870 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.